fix(extension): keep user-opened tabs free & fix agent-tab leak on session stop (issue #57)

- session_stop: exclude tabs still tracked in agentCreatedTabs from the
  release decision so a tab that failed to close is no longer mistaken for
  a user tab (which previously kept the window open and leaked the tab).
- Distinguish user-created tabs from agent-created tabs in the Agent Window
  via a pending-tab counter consumed by chrome.tabs.onCreated, so tabs the
  user opens themselves (new-tab button / Cmd+T / open in new tab) are never
  taken over by the BrowserSkill control mask.
- background overlay: decide per-tab state BEFORE showing controls
  (overlayStateForTab + pushOverlayStateForTab) so a user tab receives hidden
  on its first overlay.ready ping instead of flashing control then hiding.
- AgentWindowApi.ensureActiveTab now resolves with the activated/created tab
  id instead of void, so SessionManager can record homeTabId. This fixes the
  tsc failure flagged in review (the interface previously returned
  Promise<void> while callers treated the result as number | null).
- Wire the production tabManagement.tabs / tabsQuery deps into
  tool.session_stop, both in the dispatcher and in the disconnect cleanup.
  They were never injected, which left the agent-tab cleanup and the
  window-release path as dead code outside tests (behaviour identical to
  main). Added a dispatcher-level integration test that fails without the
  wiring: a surviving user tab must release the window, not close it.

apps/extension/src/tools/__tests__/console.test.ts

@@ -13,7 +13,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     }),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/dispatcher.test.ts

@@ -55,7 +55,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 4242),
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     await sessions.start("aa11");
@@ -117,7 +117,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 4242),
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -140,7 +140,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create,
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -158,7 +158,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 4242),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     await sessions.start("aa11");
@@ -172,6 +172,48 @@ describe("ToolDispatcher", () => {
     expect(sent[0]).toEqual({ id: "r-1", result: {} });
   });
 
+  it("wires the production tab APIs into tool.session_stop so a surviving user tab releases the window", async () => {
+    // Regression guard for the deps that session_stop reads directly: when
+    // `tabManagement.tabs` / `tabsQuery` are not injected by the dispatcher,
+    // the agent-tab cleanup and the release decision silently no-op and the
+    // Agent Window is closed even though a user tab is still open (issue #57).
+    const removeTab = vi.fn(async () => {});
+    const closeWindow = vi.fn(async () => {});
+    // After cleanup the window still holds one tab (id 99) that is neither
+    // the home tab nor an agent-created tab — i.e. a genuine user tab.
+    vi.stubGlobal("chrome", {
+      tabs: {
+        remove: removeTab,
+        query: vi.fn(async () => [{ id: 99, windowId: 4242, active: true }]),
+      },
+    });
+    const { transport, sent, deliver } = fakeTransport();
+    const sessions = new SessionManager({
+      agentWindow: {
+        create: vi.fn(async () => 4242),
+        remove: closeWindow,
+        ensureActiveTab: vi.fn(async () => 1),
+      },
+    });
+    await sessions.start("aa11");
+    // Register tab 7 as agent-created (pending counter + onCreated classify).
+    sessions.markAgentTabPending(4242);
+    sessions.classifyNewTab(7, 4242);
+
+    const dispatcher = new ToolDispatcher({ transport, sessions });
+    dispatcher.start();
+
+    deliver(makeRequest("tool.session_stop", { session_id: "aa11" }));
+    await flushMicrotasks();
+
+    // The agent tab is closed through the real chrome.tabs surface...
+    expect(removeTab).toHaveBeenCalledWith(7);
+    // ...and the window is released rather than closed, so the user's tab survives.
+    expect(closeWindow).not.toHaveBeenCalled();
+    expect(sessions.has("aa11")).toBe(false);
+    expect(sent[0]).toEqual({ id: "r-1", result: { window_released: true } });
+  });
+
   it("routes tool.console through the CDP console buffer", async () => {
     vi.stubGlobal("chrome", {
       tabs: {
@@ -183,7 +225,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 4242),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     await sessions.start("aa11");
@@ -238,7 +280,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 4242),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     await sessions.start("aa11");
@@ -274,7 +316,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 4242),
         remove,
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     await sessions.start("aa11");
@@ -322,7 +364,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -342,7 +384,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -366,7 +408,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -383,7 +425,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -400,7 +442,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const onSessionsChanged = vi.fn();
@@ -422,7 +464,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const onBrowserControlResumed = vi.fn();
@@ -456,7 +498,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const order: string[] = [];
@@ -538,7 +580,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const cdp = {
@@ -599,7 +641,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -636,7 +678,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 4242),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     await sessions.start("aa11");
@@ -688,7 +730,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -722,7 +764,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 4242),
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     transport.send = () => {
@@ -744,7 +786,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 5555),
         remove,
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     transport.send = () => {
@@ -772,7 +814,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(() => createPromise),
         remove: vi.fn(async () => {}),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -823,7 +865,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(async () => 1),
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });
@@ -844,7 +886,7 @@ describe("ToolDispatcher", () => {
       agentWindow: {
         create: vi.fn(() => createPromise),
         remove: vi.fn(),
-        ensureActiveTab: vi.fn(async () => {}),
+        ensureActiveTab: vi.fn(async () => 1),
       },
     });
     const dispatcher = new ToolDispatcher({ transport, sessions });

apps/extension/src/tools/__tests__/emulate.test.ts

@@ -20,7 +20,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     }),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/evaluate.test.ts

@@ -12,7 +12,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     }),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/interaction.test.ts

@@ -21,7 +21,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     }),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/navigation.test.ts

@@ -21,7 +21,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     }),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/network.test.ts

@@ -12,7 +12,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     }),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/observation.test.ts

@@ -28,7 +28,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     }),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/session.test.ts

@@ -1,8 +1,26 @@
 import { describe, expect, it, vi } from "vitest";
 import { SessionManager } from "@/session-manager/manager";
 import { handleSessionStop } from "../session";
+import type { ChromeTabsApi } from "../shared";
 import { type AgentOverlayResetApi, type ChromeWindowsApi, type TabMutationApi } from "../tabs";
 
+/** Build a read-only query api over a FakeState. */
+function makeQuery(state: FakeState): ChromeTabsApi {
+  return {
+    get: vi.fn(async (id) => {
+      const t = state.tabs.get(id);
+      if (!t) throw new Error(`tab ${id} not found`);
+      return t;
+    }),
+    query: vi.fn(async (q: chrome.tabs.QueryInfo) => {
+      const w = q.windowId;
+      return Array.from(state.tabs.values()).filter(
+        (t) => typeof w !== "number" || t.windowId === w,
+      );
+    }),
+  };
+}
+
 function fakeAgentWindow(ids: number[]) {
   let i = 0;
   const create = vi.fn(async () => {
@@ -11,7 +29,7 @@ function fakeAgentWindow(ids: number[]) {
     return id;
   });
   const remove = vi.fn(async () => {});
-  const ensureActiveTab = vi.fn(async () => {});
+  const ensureActiveTab = vi.fn(async () => 0);
   return { create, remove, ensureActiveTab };
 }
 
@@ -30,7 +48,9 @@ function makeApis(
 } {
   const tabs: TabMutationApi = {
     create: vi.fn(),
-    remove: vi.fn(async () => {}),
+    remove: vi.fn(async (id: number) => {
+      state.tabs.delete(id);
+    }),
     update: vi.fn(async (_id, _p) => undefined),
     get: vi.fn(async (id) => {
       const t = state.tabs.get(id);
@@ -268,3 +288,216 @@ describe("handleSessionStop with auto-return", () => {
     expect(ctx.refStore.isEmpty()).toBe(true);
   });
 });
+
+describe("handleSessionStop window release (issue #57)", () => {
+  const agentWindowId = 100;
+
+  it("releases the window when user-created tabs remain", async () => {
+    const aw = fakeAgentWindow([agentWindowId]);
+    // ensureActiveTab returns the home tab id (10). We override the fake to
+    // return a known id.
+    aw.ensureActiveTab = vi.fn(async () => 10);
+    const sm = new SessionManager({ agentWindow: aw });
+    const ctx = await sm.start("aa11");
+    ctx.agentCreatedTabs.add(11);
+    ctx.agentCreatedTabs.add(12);
+    // home tab id from ensureActiveTab override
+    ctx.homeTabId = 10;
+    // user tab 99 (created via Chrome UI, NOT in agentCreatedTabs)
+    const state: FakeState = {
+      tabs: new Map([
+        [10, { id: 10, windowId: agentWindowId } as chrome.tabs.Tab],
+        [11, { id: 11, windowId: agentWindowId } as chrome.tabs.Tab],
+        [12, { id: 12, windowId: agentWindowId } as chrome.tabs.Tab],
+        [99, { id: 99, windowId: agentWindowId } as chrome.tabs.Tab],
+      ]),
+      windowsClosed: new Set(),
+      moves: [],
+    };
+    const { tabs, windows } = makeApis(state);
+    const query = makeQuery(state);
+
+    const res = await handleSessionStop(
+      sm,
+      { session_id: "aa11" },
+      { tabManagement: { tabs, windows }, tabsQuery: query },
+    );
+    if ("code" in res) throw new Error(`unexpected error: ${JSON.stringify(res)}`);
+    expect(res.window_released).toBe(true);
+    // agent tabs + home removed, user tab 99 kept
+    expect((tabs.remove as ReturnType<typeof vi.fn>).mock.calls.map((c) => c[0]).sort()).toEqual([
+      10, 11, 12,
+    ]);
+    expect(state.tabs.has(99)).toBe(true);
+    // window released (dropOnly), not closed
+    expect(aw.remove).not.toHaveBeenCalled();
+    expect(sm.has("aa11")).toBe(false);
+  });
+
+  it("closes the window (not release) when no user tabs remain", async () => {
+    const aw = fakeAgentWindow([agentWindowId]);
+    aw.ensureActiveTab = vi.fn(async () => 10);
+    const sm = new SessionManager({ agentWindow: aw });
+    const ctx = await sm.start("aa11");
+    ctx.agentCreatedTabs.add(11);
+    ctx.homeTabId = 10;
+    const state: FakeState = {
+      tabs: new Map([
+        [10, { id: 10, windowId: agentWindowId } as chrome.tabs.Tab],
+        [11, { id: 11, windowId: agentWindowId } as chrome.tabs.Tab],
+      ]),
+      windowsClosed: new Set(),
+      moves: [],
+    };
+    const { tabs, windows } = makeApis(state);
+    const query = makeQuery(state);
+
+    const res = await handleSessionStop(
+      sm,
+      { session_id: "aa11" },
+      { tabManagement: { tabs, windows }, tabsQuery: query },
+    );
+    if ("code" in res) throw new Error(`unexpected error: ${JSON.stringify(res)}`);
+    expect(res.window_released).toBeFalsy();
+    expect(aw.remove).toHaveBeenCalledWith(agentWindowId);
+    expect(sm.has("aa11")).toBe(false);
+  });
+
+  it("is non-fatal when an agent tab is already gone", async () => {
+    const aw = fakeAgentWindow([agentWindowId]);
+    aw.ensureActiveTab = vi.fn(async () => 10);
+    const sm = new SessionManager({ agentWindow: aw });
+    const ctx = await sm.start("aa11");
+    ctx.agentCreatedTabs.add(11); // no longer in state → remove throws
+    ctx.homeTabId = 10;
+    const state: FakeState = {
+      tabs: new Map([[10, { id: 10, windowId: agentWindowId } as chrome.tabs.Tab]]),
+      windowsClosed: new Set(),
+      moves: [],
+    };
+    const { tabs, windows } = makeApis(state);
+    (tabs.remove as ReturnType<typeof vi.fn>).mockImplementation(async (id: number) => {
+      if (id === 11) throw new Error("tab 11 already closed");
+      state.tabs.delete(id); // home (10) removed normally
+    });
+    const query = makeQuery(state);
+
+    const res = await handleSessionStop(
+      sm,
+      { session_id: "aa11" },
+      { tabManagement: { tabs, windows }, tabsQuery: query },
+    );
+    if ("code" in res) throw new Error(`unexpected error: ${JSON.stringify(res)}`);
+    // user tab 10? no — 10 is home, removed. window would be empty → close.
+    expect(res.window_released).toBeFalsy();
+    expect(aw.remove).toHaveBeenCalled();
+  });
+
+  it("degrades to close-window when tabsQuery is missing", async () => {
+    const aw = fakeAgentWindow([agentWindowId]);
+    aw.ensureActiveTab = vi.fn(async () => 10);
+    const sm = new SessionManager({ agentWindow: aw });
+    const ctx = await sm.start("aa11");
+    ctx.agentCreatedTabs.add(11);
+    ctx.homeTabId = 10;
+    const state: FakeState = {
+      tabs: new Map([
+        [10, { id: 10, windowId: agentWindowId } as chrome.tabs.Tab],
+        [11, { id: 11, windowId: agentWindowId } as chrome.tabs.Tab],
+      ]),
+      windowsClosed: new Set(),
+      moves: [],
+    };
+    const { tabs, windows } = makeApis(state);
+
+    const res = await handleSessionStop(
+      sm,
+      { session_id: "aa11" },
+      { tabManagement: { tabs, windows } }, // no tabsQuery
+    );
+    if ("code" in res) throw new Error(`unexpected error: ${JSON.stringify(res)}`);
+    // No query available → conservatively close the window.
+    expect(res.window_released).toBeFalsy();
+    expect(aw.remove).toHaveBeenCalledWith(agentWindowId);
+  });
+
+  it("degrades to close-window when tabsQuery.query throws", async () => {
+    const aw = fakeAgentWindow([agentWindowId]);
+    aw.ensureActiveTab = vi.fn(async () => 10);
+    const sm = new SessionManager({ agentWindow: aw });
+    const ctx = await sm.start("aa11");
+    ctx.agentCreatedTabs.add(11);
+    ctx.homeTabId = 10;
+    const state: FakeState = {
+      tabs: new Map([[11, { id: 11, windowId: agentWindowId } as chrome.tabs.Tab]]),
+      windowsClosed: new Set(),
+      moves: [],
+    };
+    const { tabs, windows } = makeApis(state);
+    const query = makeQuery(state);
+    (query.query as ReturnType<typeof vi.fn>).mockImplementation(async () => {
+      throw new Error("query failed");
+    });
+
+    const res = await handleSessionStop(
+      sm,
+      { session_id: "aa11" },
+      { tabManagement: { tabs, windows }, tabsQuery: query },
+    );
+    if ("code" in res) throw new Error(`unexpected error: ${JSON.stringify(res)}`);
+    expect(res.window_released).toBeFalsy();
+    expect(aw.remove).toHaveBeenCalled();
+  });
+
+  it("tracks agentCreatedTabs across tab_create / tab_close", async () => {
+    const aw = fakeAgentWindow([agentWindowId]);
+    aw.ensureActiveTab = vi.fn(async () => 10);
+    const sm = new SessionManager({ agentWindow: aw });
+    const ctx = await sm.start("aa11");
+    // Simulate handleTabCreate adding, then handleTabClose removing.
+    ctx.agentCreatedTabs.add(11);
+    expect(ctx.agentCreatedTabs.has(11)).toBe(true);
+    ctx.agentCreatedTabs.delete(11); // as handleTabClose does on success
+    expect(ctx.agentCreatedTabs.has(11)).toBe(false);
+    // Unknown id delete is a safe no-op (user-closed tab).
+    expect(() => ctx.agentCreatedTabs.delete(999)).not.toThrow();
+  });
+
+  it("closes the window (not release) when an agent tab fails to close", async () => {
+    // Regression: a leaked agent tab (still in agentCreatedTabs, but
+    // still present because Step 4 remove() threw) must NOT be mistaken
+    // for a user tab. Otherwise the window would be released (dropOnly)
+    // and the agent tab would leak (issue #57 regression).
+    const aw = fakeAgentWindow([agentWindowId]);
+    aw.ensureActiveTab = vi.fn(async () => 10);
+    const sm = new SessionManager({ agentWindow: aw });
+    const ctx = await sm.start("aa11");
+    ctx.agentCreatedTabs.add(11); // Step 4 remove() will throw for this tab
+    ctx.homeTabId = 10;
+    const state: FakeState = {
+      tabs: new Map([
+        [10, { id: 10, windowId: agentWindowId } as chrome.tabs.Tab],
+        [11, { id: 11, windowId: agentWindowId } as chrome.tabs.Tab],
+      ]),
+      windowsClosed: new Set(),
+      moves: [],
+    };
+    const { tabs, windows } = makeApis(state);
+    (tabs.remove as ReturnType<typeof vi.fn>).mockImplementation(async (id: number) => {
+      if (id === 11) throw new Error("tab 11 failed to close");
+      state.tabs.delete(id); // home (10) removed normally; 11 lingers
+    });
+    const query = makeQuery(state);
+
+    const res = await handleSessionStop(
+      sm,
+      { session_id: "aa11" },
+      { tabManagement: { tabs, windows }, tabsQuery: query },
+    );
+    if ("code" in res) throw new Error(`unexpected error: ${JSON.stringify(res)}`);
+    // The leaked agent tab must NOT keep the window open.
+    expect(res.window_released).toBeFalsy();
+    expect(aw.remove).toHaveBeenCalledWith(agentWindowId);
+    expect(sm.has("aa11")).toBe(false);
+  });
+});

apps/extension/src/tools/__tests__/shared.test.ts

@@ -12,7 +12,7 @@ function fakeAgentWindow() {
   return {
     create: vi.fn(async () => 100),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/snapshot-ref.test.ts

@@ -11,7 +11,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     },
     remove: async () => {},
-    ensureActiveTab: async () => {},
+    ensureActiveTab: async () => 1,
   };
 }
 

apps/extension/src/tools/__tests__/tabs.test.ts

@@ -23,7 +23,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     }),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/waits.test.ts

@@ -12,7 +12,7 @@ function fakeAgentWindow(ids: number[]) {
       return id;
     }),
     remove: vi.fn(async () => {}),
-    ensureActiveTab: vi.fn(async () => {}),
+    ensureActiveTab: vi.fn(async () => 1),
   };
 }
 

apps/extension/src/tools/__tests__/window.test.ts

@@ -11,7 +11,7 @@ function fakeAgentWindow(ids: number[]) {
     return id;
   });
   const remove = vi.fn(async () => {});
-  const ensureActiveTab = vi.fn(async () => {});
+  const ensureActiveTab = vi.fn(async () => 1);
   return { create, remove, ensureActiveTab };
 }
 

apps/extension/src/tools/dispatcher.ts

@@ -66,6 +66,7 @@ import {
 import { chromeTabsApi, lookupSession, resolveTargetTab } from "./shared";
 import {
   type BorrowConfirmationApprover,
+  chromeTabMutationApi,
   handleTabBorrow,
   handleTabClose,
   handleTabCreate,
@@ -298,6 +299,11 @@ export class ToolDispatcher {
         await this.releaseHoverLatch((req.params as SessionStopParams).session_id);
         return handleSessionStop(this.sessions, req.params as SessionStopParams, {
           cdp: this.cdp,
+          // Must be wired in production: the agent-tab cleanup and the
+          // window-release decision (issue #57) read these deps directly
+          // and silently no-op when they are absent.
+          tabManagement: { tabs: chromeTabMutationApi },
+          tabsQuery: chromeTabsApi,
           signal,
         });
       }

apps/extension/src/tools/session.ts

@@ -2,6 +2,7 @@ import { type SessionManager, SessionStartCleanupError } from "@/session-manager
 import type { RpcError } from "@/transport/types";
 import { rpcError } from "./errors";
 import { clearRecordingForSession } from "./record";
+import type { ChromeTabsApi } from "./shared";
 import { isRpcError } from "./shared";
 import { returnBorrowedTab, type TabManagementDeps } from "./tabs";
 
@@ -73,6 +74,12 @@ export interface SessionStopResult {
   /** Tab ids whose return path failed; those entries remain borrowed so
    *  shutdown can be retried without closing the Agent Window. */
   return_failures?: Array<{ tab_id: number; code: string; message: string }>;
+  /**
+   * True when the Agent Window was *released* to the user (instead of being
+   * closed) because it still contained user-created tabs after the agent's own
+   * tabs were closed. Single-session scope.
+   */
+  window_released?: boolean;
 }
 
 export interface SessionStopDeps {
@@ -87,6 +94,13 @@ export interface SessionStopDeps {
    * without a real browser.
    */
   tabManagement?: TabManagementDeps;
+  /**
+   * Read-only Chrome tabs API used to *query* remaining tabs before deciding
+   * whether to release the window. Kept separate from `tabManagement.tabs`
+   * (a `TabMutationApi` that has no `query`) so the mutation interface stays
+   * pure. Tests can inject a fake `ChromeTabsApi` too.
+   */
+  tabsQuery?: ChromeTabsApi;
 }
 
 /**
@@ -152,8 +166,10 @@ export async function handleSessionStart(
  *      cleanly (review parity with M6).
  *   3. Detach CDP sessions the extension still holds for this
  *      session (no-op if M6/M7 didn't attach to any tab).
- *   4. Close the Agent Window. SessionManager.stop() removes the
- *      Chrome window and forgets the context.
+ *   4. Close the agent-created tabs and the home tab (design §3.2).
+ *   5. If any tab remains — those are user-created tabs — release the
+ *      window to the user (dropOnly) instead of closing it, so user
+ *      tabs survive. Otherwise close the window as before.
  *
  * Failures in step 1 keep the Agent Window open: a failed borrowed tab
  * may still be there, so closing the window would risk losing user
@@ -253,8 +269,76 @@ export async function handleSessionStop(
     return { code: "cancelled", message: "session_stop aborted before window close" };
   }
 
-  // Step 4: close the Agent Window and drop the context.
-  await manager.stop(params.session_id);
+  // Step 4: close the agent-created tabs and the home tab. `tabsApi` is a
+  // TabMutationApi (remove only); `queryApi` is a separate read-only
+  // ChromeTabsApi. If neither is injected, we conservatively fall back to
+  // closing the window (see Step 5).
+  const tabsApi = deps.tabManagement?.tabs;
+  const queryApi = deps.tabsQuery;
+
+  if (tabsApi) {
+    // 4a: close each agent-created tab that still exists.
+    const agentCreatedTabIds = Array.from(ctx.agentCreatedTabs);
+    for (const tabId of agentCreatedTabIds) {
+      try {
+        await tabsApi.remove(tabId);
+        ctx.agentCreatedTabs.delete(tabId);
+      } catch (err) {
+        // Tab may already be gone (closed by the user). Non-fatal.
+        console.warn(`[bsk session_stop] failed to close agent tab ${tabId}`, err);
+      }
+    }
+
+    // 4b: close the home tab by id (not by URL — avoids deleting a user's
+    // `about:blank` tab). Non-fatal if it's already gone.
+    if (ctx.homeTabId != null) {
+      try {
+        await tabsApi.remove(ctx.homeTabId);
+      } catch (err) {
+        console.warn(`[bsk session_stop] failed to close home tab`, err);
+      }
+    }
+  }
+
+  // Step 5: decide whether to release (keep) the window or close it.
+  let shouldRelease = false;
+  if (queryApi) {
+    try {
+      const liveWindowTabs = await queryApi.query({ windowId: ctx.agentWindowId });
+      // Only genuine *user* tabs count toward keeping the window open.
+      // An agent tab that failed to close in Step 4 may still be present
+      // here; if we counted it as a reason to release (dropOnly), the
+      // window would be kept and that agent tab would leak (issue #57
+      // regression). Exclude any id still tracked in agentCreatedTabs.
+      const userTabs = liveWindowTabs.filter((t) => {
+        if (t.id === undefined) return false;
+        if (t.id === ctx.homeTabId) return false;
+        return !ctx.agentCreatedTabs.has(t.id);
+      });
+      const leakedAgentTabs = liveWindowTabs.filter(
+        (t) => t.id !== undefined && ctx.agentCreatedTabs.has(t.id),
+      );
+      if (leakedAgentTabs.length > 0) {
+        console.warn(
+          `[bsk session_stop] ${leakedAgentTabs.length} agent tab(s) failed to close; forcing window close instead of release`,
+          leakedAgentTabs.map((t) => t.id),
+        );
+      }
+      shouldRelease = userTabs.length > 0;
+    } catch {
+      // Query failed (e.g. window already gone) — conservatively close it.
+      shouldRelease = false;
+    }
+  }
+
+  if (shouldRelease) {
+    // Keep the window + its user tabs; only drop the session binding.
+    await manager.stop(params.session_id, { dropOnly: true });
+    result.window_released = true;
+  } else {
+    // Window is empty (or we couldn't verify state) — close it.
+    await manager.stop(params.session_id);
+  }
 
   return result;
 }

apps/extension/src/tools/tabs.ts

@@ -426,9 +426,18 @@ export async function handleTabCreate(
   const paramErr = validateTabCreateParams(params);
   if (paramErr) return paramErr;
 
+  // Flag the pending agent tab *before* create so the chrome.tabs.onCreated
+  // listener (background.ts) can tell this tab apart from a user-opened tab.
+  manager.markAgentTabPending(ctx.agentWindowId);
+
   const tab = await createTabAndCleanup(deps, buildCreateProps(ctx, params));
   if (isRpcError(tab)) return tab;
 
+  // Track agent-created tabs so session_stop can clean them up (design §3.1).
+  // The onCreated listener also adds this id; this is an idempotent fallback
+  // in case the listener has not fired yet.
+  ctx.agentCreatedTabs.add(tab.id);
+
   return {
     tab_id: tab.id,
     window_id: ctx.agentWindowId,
@@ -526,6 +535,9 @@ export async function handleTabClose(
   }
   try {
     await getTabsApi(deps).remove(params.tab_id);
+    // Keep the tracking set accurate so session_stop won't try to close a
+    // tab that's already gone (design §3.1).
+    ctx.agentCreatedTabs.delete(params.tab_id);
   } catch (err) {
     return {
       code: "protocol_error",